Co-expression analysis

Gene ID Os01g0176700
Gene name
Homology with ArabidopsisSimilar to At2g03500: myb family transcription factor (HF=1e-12)
Module size 13 genes
NF 0.20
%ile 18.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.96Os01g0176700AK109808.1-Myb, DNA-binding domain containing protein1e-12At2g03500myb family transcription factorO.I.H.G.S.X.
0.3846.90.98Os10g01714009638.m00781-Cytochrome P450 family protein9e-1At2g37480unknown proteinO.I.H.G.S.X.
0.3846.90.98Os02g04350009630.m02216-Translocation protein Sec62 family protein7e-8At3g20920translocation protein-relatedO.I.H.G.S.X.
0.3032.70.98Os01g05351009629.m03301--4e-1At5g03660unknown proteinO.I.H.G.S.X.
0.2321.20.98Os09g0451100AK063736.1--3e-1At5g03210unknown proteinO.I.H.G.S.X.
0.2117.90.97Os04g04121509632.m03223--1e+0At3g56260unknown proteinO.I.H.G.S.X.
0.1510.30.98Os10g04151409638.m02343--3e-1At1g32290unknown proteinO.I.H.G.S.X.
0.149.30.97Os05g01375009633.m00395--1e-8At1g68150WRKY9O.I.H.G.S.X.
0.138.20.98Os04g01169009632.m00170-Conserved hypothetical protein2e-2At5g23100unknown proteinO.I.H.G.S.X.
0.138.20.97Os08g02350009636.m01357--9e-1At5g26890unknown proteinO.I.H.G.S.X.
0.127.20.98Os12g0107900NM_194743.1--3e+0At4g18310unknown proteinO.I.H.G.S.X.
0.116.50.97Os06g0277500NM_196635.1--6e-3At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)O.I.H.G.S.X.
0.105.70.97Os10g0571700AK063029.1-Conserved hypothetical protein3e-1At1g02840SR1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
76.499.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0271GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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