CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0136100

Gene name
Homology with Arabidopsis Similar to At1g53540: 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) (HF=1e-4)

Module size 6 genes

NF 0.19

%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.91 98.9 0.84 Os01g0136100 X60820.1 - 16.9 kDa class I heat shock protein 1e-4 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) O.I. H.G. S.X.
0.67 87.2 0.92 Os03g0277300 9631.m01656 - Heat shock protein 70 7e-98 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) O.I. H.G. S.X.
0.60 79.7 0.87 Os03g0245800 AB020973.1 - - 5e-1 At5g42965 nucleic acid binding / ribonuclease H O.I. H.G. S.X.
0.60 79.7 0.89 Os01g0136200 AK121025.1 - 17.7 kDa heat shock protein 1e-4 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) O.I. H.G. S.X.
0.05 2.5 0.85 Os03g0336100 AK105307.1 - RmlC-like cupin family protein 2e-1 At2g37750 unknown protein O.I. H.G. S.X.
0.05 2.5 0.84 Os10g0492600 AB114828.1 - Tonoplast membrane integral protein ZmTIP3-1 6e-4 At2g01340 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
52.3 99.9 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
18.4 99.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.4 98.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.4 98.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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