Co-expression analysis

Gene ID Os01g0106200
Gene name
Homology with ArabidopsisSimilar to At4g39220: ATRER1A (HF=2e-12)
Module size 8 genes
NF 0.29
%ile 30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8896.80.95Os01g0106200AK060999.1-RER1A protein (AtRER1A)2e-12At4g39220ATRER1AO.I.H.G.S.X.
0.4660.90.95Os01g0844400AK071686.1-Zn-finger, DHHC type domain containing protein1e-8At3g09320zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.3541.70.96Os07g0159500AK065419.1-Conserved hypothetical protein3e-3At5g45410unknown proteinO.I.H.G.S.X.
0.3134.50.96Os05g0455800AK064864.1-Protein of unknown function DUF649 domaincontaining protein1e-2At5g56140KH domain-containing proteinO.I.H.G.S.X.
0.2931.10.97Os01g0703600AK065538.1-Mu1 adaptin1e-67At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.2727.50.97Os04g0629000AK120653.1-Conserved hypothetical protein3e-1At3g21865PEX22 (peroxin 22)O.I.H.G.S.X.
0.1510.30.96Os02g0209100AK105040.1-Coatomer WD associated region domain containingprotein5e-9At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.138.20.96Os02g0787500AY224451.1-The start codon is not identified.7e-39At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.399.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
5.496.8GSM154945Leaf_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
5.196.6GSM154946Leaf_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
5.196.6GSM154947Leaf_DMSO-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
4.796.4GSM154953Leaf_DMSO-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
4.696.3GSM154951Leaf_DMSO-treatment_120min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
4.596.3GSM159210Seed (S2, 3 - 4 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
4.496.2GSM154952Leaf_DMSO-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
4.296.0GSM159191Young inflorescence (P1, upto 3 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage