Co-expression analysis

Gene ID HgAffx.8628.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g03050: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.06
%ile 19.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.80HgAffx.8628.1.S1_atCB379873--3e-1At5g03050unknown proteinO.I.H.G.S.X.
0.1721.20.97Gma.17309.1.S1_atAW396618--1e-3At5g16800GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.0912.00.96GmaAffx.29942.1.S1_atAW567850--1e+0At2g04870unknown proteinO.I.H.G.S.X.
0.035.80.98GmaAffx.71620.1.S1_atBM523371--9e-24At1g26830ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)O.I.H.G.S.X.
0.035.80.98GmaAffx.59378.1.S1_atBI425133--1e+0At1g80100AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)O.I.H.G.S.X.
0.024.50.98GmaAffx.36014.1.S1_atBU550374--1e+0At1g24440protein binding / zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage