Co-expression analysis

Gene ID HgAffx.8305.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g47265: unknown protein (HF=1e+0)
Module size 7 genes
NF 0.57
%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3548.60.73HgAffx.8305.1.S1_atCB380196--1e+0At1g47265unknown proteinO.I.H.G.S.X.
0.7187.80.83GmaAffx.11802.1.A1_atAW310103--2e-8At1g11720ATSS3 (starch synthase 3)O.I.H.G.S.X.
0.6786.10.83HgAffx.17742.1.S1_atCB278735--1e+0At5g05250unknown proteinO.I.H.G.S.X.
0.6080.70.86PsAffx.C129000013_atPsAffx.C129000013--1e-3At2g36100integral membrane family proteinO.I.H.G.S.X.
0.6080.70.86PsAffx.C2000250_atPsAffx.C2000250--7e-1At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.4867.70.84PsAffx.C6000193_atPsAffx.C6000193--1e+1Atmg00450-O.I.H.G.S.X.
0.4463.30.86HgAffx.5776.1.S1_atCB826435--1e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
42.399.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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