Co-expression analysis

Gene ID HgAffx.4455.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g44304: unknown protein (HF=5e+0)
Module size 18 genes
NF 0.85
%ile 99.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8693.00.76HgAffx.4455.1.S1_atCD748970--5e+0At2g44304unknown proteinO.I.H.G.S.X.
0.9198.60.81HgAffx.3013.1.S1_atCK349173--3e-1At1g66890-O.I.H.G.S.X.
0.9198.60.82PsAffx.C115000050_s_atPsAffx.C115000050--2e+0At5g66490unknown proteinO.I.H.G.S.X.
0.9198.60.82HgAffx.11003.1.S1_atCB824101--4e+0At3g28630-O.I.H.G.S.X.
0.9198.60.79PsAffx.C1000175_atPsAffx.C1000175--5e+0At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.9198.60.81GmaAffx.55284.1.S1_atBM108343--3e+0At5g10390histone H3O.I.H.G.S.X.
0.9198.60.82PsAffx.C68000072_atPsAffx.C68000072--4e+0At2g41410calmodulin, putativeO.I.H.G.S.X.
0.8893.40.85HgAffx.5776.1.S1_atCB826435--1e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.
0.8492.60.81PsAffx.C177000015_atPsAffx.C177000015--2e-1At4g25150acid phosphatase, putativeO.I.H.G.S.X.
0.8492.60.83PsAffx.C63000067_atPsAffx.C63000067--1e-1At5g05150AtATG18eO.I.H.G.S.X.
0.8291.90.84PsAffx.C6000193_atPsAffx.C6000193--1e+1Atmg00450-O.I.H.G.S.X.
0.8291.90.82HgAffx.24315.1.S1_atCB374815--9e-1At4g15930microtubule motorO.I.H.G.S.X.
0.8091.50.81HgAffx.17742.1.S1_atCB278735--1e+0At5g05250unknown proteinO.I.H.G.S.X.
0.7589.50.82PsAffx.C154000024_atPsAffx.C154000024--2e-1At5g62160AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)O.I.H.G.S.X.
0.7087.10.82PsAffx.C2000250_atPsAffx.C2000250--7e-1At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.6986.80.85PsAffx.C47000085_atPsAffx.C47000085--2e+0At1g043502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.6986.80.81PsAffx.C86000057_atPsAffx.C86000057--2e+0At1g06690aldo/keto reductase family proteinO.I.H.G.S.X.
0.6786.10.82PsAffx.C129000013_atPsAffx.C129000013--1e-3At2g36100integral membrane family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
45.999.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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