Co-expression analysis

Gene ID HgAffx.3912.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g15790: unknown protein (HF=6e-4)
Module size 23 genes
NF 0.11
%ile 30.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.70HgAffx.3912.1.A1_atCK348778--6e-4At4g15790unknown proteinO.I.H.G.S.X.
0.6483.40.88PsAffx.C8000052_atPsAffx.C8000052--4e-1At2g15280reticulon family protein (RTNLB10)O.I.H.G.S.X.
0.4665.50.84PsAffx.C14000078_atPsAffx.C14000078--4e-1At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)O.I.H.G.S.X.
0.4665.50.81PsAffx.C99000057_atPsAffx.C99000057--2e+0At5g04490VTE5 (vitamin E pathway gene5)O.I.H.G.S.X.
0.4158.10.79PsAffx.C38000019_atPsAffx.C38000019--2e-1At2g02061unknown proteinO.I.H.G.S.X.
0.4158.10.86PsAffx.psMA013xH08f_atPsAffx.psMA013xH08f--4e+0At5g54095unknown proteinO.I.H.G.S.X.
0.4158.10.88PsAffx.psZS003xA01f_atPsAffx.psZS003xA01f--5e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.
0.4158.10.88PsAffx.C145000027_atPsAffx.C145000027--1e+0At3g28220meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3853.30.79PsAffx.C15000001_s_atPsAffx.C15000001--2e+0At2g01670atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17)O.I.H.G.S.X.
0.3346.10.91PsAffx.C83000002_atPsAffx.C83000002--9e-1At3g28980unknown proteinO.I.H.G.S.X.
0.3243.70.90PsAffx.C6000181_atPsAffx.C6000181--4e+0At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.H.G.S.X.
0.3142.20.85PsAffx.CL572Contig1_atPsAffx.CL572Contig1--2e+0At3g03370-O.I.H.G.S.X.
0.2532.60.92PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.1417.50.88PsAffx.C236000007_s_atPsAffx.C236000007--9e+0At5g35300unknown proteinO.I.H.G.S.X.
0.1316.30.91PsAffx.C86000041_atPsAffx.C86000041--2e-1At1g31330PSAF (photosystem I subunit F)O.I.H.G.S.X.
0.1316.30.91PsAffx.C85000056_atPsAffx.C85000056--6e-1At4g05270ubiquitin family proteinO.I.H.G.S.X.
0.1114.20.91HgAffx.22459.1.S1_atBI396621--7e-1At3g57500unknown proteinO.I.H.G.S.X.
0.0912.00.91HgAffx.23197.1.S1_atCB281621--2e+0At2g01100unknown proteinO.I.H.G.S.X.
0.0912.00.91HgAffx.19372.1.S1_atCA939809--2e-1At2g33655F-box family proteinO.I.H.G.S.X.
0.0811.00.89GmaAffx.74485.1.A1_atBU550283--7e-2At3g09800protein bindingO.I.H.G.S.X.
0.069.00.90HgAffx.14481.1.S1_atCB299659--4e+0At5g51400unknown proteinO.I.H.G.S.X.
0.047.00.91PsAffx.psHA010iH10r_s_atPsAffx.psHA010iH10r--1e+1At5g30341unknown proteinO.I.H.G.S.X.
0.013.40.90Gma.9379.1.A1_atCA800388--1e+0At1g22885unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.199.5GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
11.699.4GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
8.299.0GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.799.0GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.198.5GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.897.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.897.9GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.796.8GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29222925_C029.1B.R9B2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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