Co-expression analysis

Gene ID	HgAffx.3667.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g01230: FtsJ-like methyltransferase family protein (HF=8e-1)
Module size	6 genes
NF	0.23
%ile	47.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.80	HgAffx.3667.1.A1_at	CK349023	-	-	8e-1	At5g01230	FtsJ-like methyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	Gma.5793.4.S1_x_at	BI967780	-	-	8e-19	At3g61430	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.95	GmaAffx.10787.1.S1_at	BU965232	-	-	1e-2	At5g16790	-	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.92103.1.S1_s_at	CF806493	translationally controlled tumor-like protein	-	6e-28	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.98	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.98	Gma.8354.1.S1_at	BE658968	-	-	4e-22	At3g03070	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	96.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage