Co-expression analysis

Gene ID	HgAffx.3008.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g18295: unknown protein (HF=1e-1)
Module size	6 genes
NF	0.45
%ile	75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.36	50.8	0.65	HgAffx.3008.1.S1_at	CK349682	-	-	1e-1	At3g18295	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.80	HgAffx.3851.1.A1_at	CK348839	-	-	2e+1	At5g66005	Expressed protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.80	PsAffx.C174000021_at	PsAffx.C174000021	-	-	2e-3	At1g12665	-	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.84	HgAffx.3584.1.A1_s_at	CK349106	-	-	2e+0	At2g37110	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.82	GmaAffx.60715.1.S1_at	BU089784	-	-	5e+0	At5g53400	nuclear movement family protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.82	PsAffx.C10000051_at	PsAffx.C10000051	-	-	1e+0	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	99.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM294428	83_2450.2J.R161P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM294423	79_2455.2J.R220L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294432	87_3176.2J.SLJ3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294426	81_3163.2J.SLJ1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294437	91_2465.2J.R186U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294352	14_2471.2J.R108L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM294427	82_2447.2J.R119L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM294430	85_2455.2J.R220U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294349	11_2465.2J.R186L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294421	77_2442.2J.R198P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294375	35_2473.2J.R052L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294422	78_2467.2J.R216U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294429	84_2437.2J.R091U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294433	88_3173.2J.SLJ2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294397	55_2458.2J.R073P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294416	72_2472.2J.R108P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294436	90_2445.2J.R294U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294425	80_3168.2J.R9J1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294377	37_2463.2J.R260U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294369	2_2439.2J.R135L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294403	60_2462.2J.R176P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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