Co-expression analysis

Gene ID HgAffx.23839.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g25940: transcription factor S-II (TFIIS) domain-containing protein (HF=2e-1)
Module size 6 genes
NF 0.10
%ile 28.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.79HgAffx.23839.1.S1_atBF014010--2e-1At3g25940transcription factor S-II (TFIIS) domain-containing proteinO.I.H.G.S.X.
0.3346.10.93HgAffx.5648.1.S1_atCB826563--4e+0At3g26660LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24)O.I.H.G.S.X.
0.1923.70.93PsAffx.C52000084_atPsAffx.C52000084--2e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinO.I.H.G.S.X.
0.1518.70.94HgAffx.19601.1.S1_atCA939579--4e+0At5g51845-O.I.H.G.S.X.
0.0710.20.94HgAffx.18004.1.S1_atCB279764--2e+0At4g13000protein kinase family proteinO.I.H.G.S.X.
0.024.50.95HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.1GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
3.997.1GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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