Co-expression analysis

Gene ID HgAffx.23347.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g22880: HTB2 (HF=1e+0)
Module size 6 genes
NF 0.01
%ile 6.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.76HgAffx.23347.1.S1_atBF014502--1e+0At5g22880HTB2O.I.H.G.S.X.
0.2735.70.94PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinO.I.H.G.S.X.
0.2228.10.93GmaAffx.89500.1.A1_atCK605776--1e+1At5g48860unknown proteinO.I.H.G.S.X.
0.0811.00.92PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.013.40.95GmaAffx.89861.1.S1_s_atCK606562Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
-1.40.94GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.7GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1609286_at, orthologous to the query gene, HgAffx.23347.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9095.61609286_atAt5g22880hypothetical protein LOC100266300-3e-7At4g32890zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3853.61618404_atAt5g22880hypothetical protein LOC100247376-4e-1At5g63340unknown proteinO.I.H.G.S.X.
0.3548.51616401_atAt5g22880hypothetical protein LOC100263582-4e-1At5g07430pectinesterase family proteinO.I.H.G.S.X.
0.3446.81622643_atAt5g22880hypothetical protein LOC100262909-3e-1At5g51795Kin17 DNA-binding protein-relatedO.I.H.G.S.X.
0.3345.71612908_atAt5g22880--1e+0At1g25988-O.I.H.G.S.X.
0.3141.31614480_atAt5g22880--1e+0At4g18090unknown proteinO.I.H.G.S.X.
0.3039.41618539_atAt5g22880hypothetical protein LOC100267633-1e-2At2g41950unknown proteinO.I.H.G.S.X.
0.2837.71611108_atAt5g22880--1e+0At4g13575unknown proteinO.I.H.G.S.X.
0.2837.71613244_atAt5g22880hypothetical protein LOC100249966-2e-5At2g41040methyltransferase-relatedO.I.H.G.S.X.
0.2837.71619124_atAt5g22880--1e+0At1g08220-O.I.H.G.S.X.
0.2837.71612411_atAt5g22880--3e-1At5g06020self-incompatibility protein-relatedO.I.H.G.S.X.
0.2734.01608481_atAt5g22880hypothetical protein LOC100266017-1e-3At1g53460unknown proteinO.I.H.G.S.X.
0.2632.01615305_atAt5g22880--3e-1At2g34140Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.2632.01620148_atAt5g22880hypothetical protein LOC100252338-3e-17At3g58830haloacid dehalogenase (HAD) superfamily proteinO.I.H.G.S.X.
0.2530.51618917_atAt5g22880--1e-4At4g16370ATOPT3 (OLIGOPEPTIDE TRANSPORTER)O.I.H.G.S.X.
0.2428.71610838_atAt5g22880hypothetical protein LOC100241906-4e+0At4g10430-O.I.H.G.S.X.
0.2327.51622017_atAt5g22880hypothetical protein LOC100241648-4e-34At1g74910ADP-glucose pyrophosphorylase family proteinO.I.H.G.S.X.
0.2327.51608942_atAt5g22880hypothetical protein LOC100257993-7e-6At5g66730zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2225.61610065_atAt5g22880hypothetical protein LOC100260744-3e-1At4g09775-O.I.H.G.S.X.
0.2225.61622172_atAt5g22880hypothetical protein LOC100248966-3e-7At5g17670hydrolase, acting on ester bondsO.I.H.G.S.X.
0.2225.61612460_s_atAt5g22880hypothetical protein LOC100245544-4e-20At2g38270CXIP2 (CAX-INTERACTING PROTEIN 2)O.I.H.G.S.X.
0.2225.61610984_atAt5g22880hypothetical protein LOC100259256-1e+0At1g14200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2225.61612421_atAt5g22880hypothetical protein LOC100262002-4e+0At5g13080WRKY75O.I.H.G.S.X.
0.2124.01614257_atAt5g22880hypothetical protein LOC100250970-4e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.2022.41608602_atAt5g22880hypothetical protein LOC100264906-4e-2At3g09210PTAC13 (PLASTID TRANSCRIPTIONALLY ACTIVE13)O.I.H.G.S.X.
0.1819.41613726_atAt5g22880--4e-13At4g15110CYP97B3O.I.H.G.S.X.
0.1515.61611574_atAt5g22880hypothetical protein LOC100243229-1e-23At4g30620unknown proteinO.I.H.G.S.X.
0.1515.61612989_atAt5g22880hypothetical protein LOC100266919-7e-8At3g26900shikimate kinase family proteinO.I.H.G.S.X.
0.1515.61610823_atAt5g22880hypothetical protein LOC100255274-7e-6At3g04760pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1414.41616949_atAt5g22880hypothetical protein LOC100250114-2e-34At5g53170FTSH11 (FtsH protease 11)O.I.H.G.S.X.
0.1414.41607490_atAt5g22880hypothetical protein LOC100258031-1e-5At1g08340rac GTPase activating protein, putativeO.I.H.G.S.X.
0.1414.41615614_atAt5g22880hypothetical protein LOC100245256-3e-7At2g24630ATCSLC08O.I.H.G.S.X.
0.099.41618609_s_atAt5g22880hypothetical protein LOC100249094-1e+0At4g28556RIC7O.I.H.G.S.X.
0.077.81613468_atAt5g22880hypothetical protein LOC100250231-3e-55At3g04730IAA16O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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