Co-expression analysis

Gene ID HgAffx.23347.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g22880: HTB2 (HF=1e+0)
Module size 6 genes
NF 0.01
%ile 6.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.76HgAffx.23347.1.S1_atBF014502--1e+0At5g22880HTB2O.I.H.G.S.X.
0.2735.70.94PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinO.I.H.G.S.X.
0.2228.10.93GmaAffx.89500.1.A1_atCK605776--1e+1At5g48860unknown proteinO.I.H.G.S.X.
0.0811.00.92PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.013.40.95GmaAffx.89861.1.S1_s_atCK606562Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
-1.40.94GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.7GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.10351.1.S1_at, orthologous to the query gene, HgAffx.23347.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6182.0Ta.10351.1.S1_atAt5g22880--8e-1At5g06250transcription factorO.I.H.G.S.X.
0.4666.8TaAffx.83758.1.S1_s_atAt5g22880--2e-8At1g14000VIK (VH1-INTERACTING KINASE)O.I.H.G.S.X.
0.4362.2Ta.25620.2.S1_a_atAt5g22880--1e-3At5g63490CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.3956.1TaAffx.12601.1.S1_atAt5g22880--9e-5At2g37290RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.3854.7TaAffx.92837.1.S1_atAt5g22880--3e-10At3g05820beta-fructofuranosidase/ catalyticO.I.H.G.S.X.
0.3549.8Ta.18282.1.S1_x_atAt5g22880--5e+0At5g28040transcription regulatorO.I.H.G.S.X.
0.3346.9Ta.14012.3.S1_a_atAt5g22880--4e+0At2g26135zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2024.0Ta.5808.2.S1_a_atAt5g22880--1e+0At3g61890ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)O.I.H.G.S.X.
0.1821.0Ta.27711.1.S1_atAt5g22880--3e-3At1g21410SKP2AO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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