Co-expression analysis

Gene ID HgAffx.22681.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g04420: nucleic acid binding (HF=1e+0)
Module size 9 genes
NF 0.43
%ile 73.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3346.10.63HgAffx.22681.1.S1_atBI748872--1e+0At2g04420nucleic acid bindingO.I.H.G.S.X.
0.5071.70.81PsAffx.C137000034_s_atPsAffx.C137000034--2e-1At3g44110ATJ3O.I.H.G.S.X.
0.5071.70.85PsAffx.C115000050_s_atPsAffx.C115000050--2e+0At5g66490unknown proteinO.I.H.G.S.X.
0.5071.70.86PsAffx.C6000193_atPsAffx.C6000193--1e+1Atmg00450-O.I.H.G.S.X.
0.4463.30.73GmaAffx.61422.1.A1_atCD397768--1e+1At5g51120PABN1 (POLYADENYLATE-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4360.60.78PsAffx.psZS004xD23f_atPsAffx.psZS004xD23f--4e+0At1g29420-O.I.H.G.S.X.
0.4057.10.85HgAffx.11003.1.S1_atCB824101--4e+0At3g28630-O.I.H.G.S.X.
0.4057.10.88HgAffx.5776.1.S1_atCB826435--1e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.
0.2633.90.71PsAffx.C115000013_atPsAffx.C115000013--5e+0At2g46840-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.899.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.598.7GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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