Co-expression analysis

Gene ID HgAffx.21652.1.S1_at
Gene name
Homology with ArabidopsisSimilar to Atmg00260: - (HF=1e-1)
Module size 6 genes
NF 0.48
%ile 79.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.70HgAffx.21652.1.S1_atBI748101--1e-1Atmg00260-O.I.H.G.S.X.
0.5071.70.98Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14O.I.H.G.S.X.
0.4766.60.98GmaAffx.91487.1.S1_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.4360.60.98Gma.16125.1.S1_atBQ298270--6e-46At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.4360.60.98GmaAffx.88908.1.A1_x_atCK605775--2e-28At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.1923.70.98GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.8GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.197.3GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.696.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.496.4GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.496.4GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM147939Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.396.2GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.195.8GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.195.8GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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