Co-expression analysis

Gene ID HgAffx.20912.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g56420: unknown protein (HF=6e-2)
Module size 6 genes
NF 0.65
%ile 92.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.80HgAffx.20912.1.A1_atCK350619--6e-2At1g56420unknown proteinO.I.H.G.S.X.
0.7388.90.96PsAffx.psHB004xH08f_atPsAffx.psHB004xH08f--5e+0At3g61840unknown proteinO.I.H.G.S.X.
0.5778.80.96GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinO.I.H.G.S.X.
0.5576.30.96HgAffx.19033.4.A1_x_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.5576.30.96HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.3142.20.96HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.798.4GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.397.5GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.596.6GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1609898_at, orthologous to the query gene, HgAffx.20912.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81609898_atAt1g56420hypothetical protein LOC100265588-7e-11At5g58575-O.I.H.G.S.X.
0.5577.31610458_atAt1g56420hypothetical protein LOC100257623-2e+0At5g05420immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.4057.71611670_atAt1g56420hypothetical protein LOC100241885-9e-70At5g54750transport protein particle (TRAPP) component Bet3, putativeO.I.H.G.S.X.
0.3345.71619414_atAt1g56420hypothetical protein LOC100241708-1e-8At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.3345.71620109_s_atAt1g56420hypothetical protein LOC100243583-2e+0At3g57930unknown proteinO.I.H.G.S.X.
0.2225.61611412_atAt1g56420hypothetical protein LOC100244694-2e+0At5g37480unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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