Co-expression analysis

Gene ID HgAffx.20795.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g11430: hydroxyproline-rich glycoprotein family protein (HF=2e-1)
Module size 6 genes
NF 0.06
%ile 19.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.84HgAffx.20795.1.S1_atBI748958--2e-1At4g11430hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5576.30.93HgAffx.23882.1.S1_atBF013967--2e-1At1g52695phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.2939.00.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.1721.20.93GmaAffx.58098.1.S1_atBE331461--9e-1At2g30540glutaredoxin family proteinO.I.H.G.S.X.
0.035.80.94GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.013.40.94GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.596.6GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage