Co-expression analysis

Gene ID HgAffx.1945.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g01410: harpin-induced family protein / HIN1 family protein / harpin-responsive family protein (HF=8e-1)
Module size 18 genes
NF 0.46
%ile 77.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.93HgAffx.1945.1.A1_atCK351851--8e-1At4g01410harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.6786.10.94HgAffx.11255.1.S1_atCB935195--5e+0At3g09050unknown proteinO.I.H.G.S.X.
0.5778.80.94PsAffx.C20000118_s_atPsAffx.C20000118--6e-2At3g56440AtATG18dO.I.H.G.S.X.
0.5778.80.94PsAffx.psMA010xD09f_atPsAffx.psMA010xD09f--1e+0At1g07985Expressed proteinO.I.H.G.S.X.
0.5678.20.94HgAffx.15698.1.S1_atCB281296--4e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)O.I.H.G.S.X.
0.5374.20.94HgAffx.19746.1.S1_atCD748943--2e+0At2g44745WRKY family transcription factorO.I.H.G.S.X.
0.5374.20.94GmaAffx.31414.1.A1_atBI786718--3e-1At5g03990unknown proteinO.I.H.G.S.X.
0.5071.70.95PsAffx.psHB004xH08f_atPsAffx.psHB004xH08f--5e+0At3g61840unknown proteinO.I.H.G.S.X.
0.4665.50.94GmaAffx.15790.1.A1_atCD405768--2e+0At1g70790C2 domain-containing proteinO.I.H.G.S.X.
0.4463.30.95GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.4463.30.94PsAffx.C34000064_atPsAffx.C34000064--2e+0At5g29560calcium ion bindingO.I.H.G.S.X.
0.4158.10.94GmaAffx.1910.1.S1_atBU761686--2e-1At5g25980TGG2 (GLUCOSIDE GLUCOHYDROLASE 2)O.I.H.G.S.X.
0.4057.10.95GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinO.I.H.G.S.X.
0.3447.20.95HgAffx.19033.4.A1_x_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.3346.10.96HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.2939.00.94PsAffx.C3000160_s_atPsAffx.C3000160--4e+0At5g42860unknown proteinO.I.H.G.S.X.
0.2839.00.95GmaAffx.47834.1.A1_atAF175392.1--3e-1At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.2329.90.95GmaAffx.93289.1.S1_atCF809014--2e-33At3g26370unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
5.098.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.197.3GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.496.4GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM201113Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.396.2GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.296.0GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.195.8GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage