Co-expression analysis

Gene ID HgAffx.16785.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g17440: unknown protein (HF=6e-2)
Module size 6 genes
NF 0.13
%ile 32.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.73HgAffx.16785.1.S1_atCB375766--6e-2At4g17440unknown proteinO.I.H.G.S.X.
0.3548.60.94PsAffx.C59000014_atPsAffx.C59000014--1e-1At5g53910(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.2735.70.94PsAffx.C123000031_atPsAffx.C123000031--2e+0At4g22930PYR4 (PYRIMIDIN 4)O.I.H.G.S.X.
0.0912.00.94PsAffx.C162000008_atPsAffx.C162000008--8e-2At5g08160ATPK3O.I.H.G.S.X.
0.0710.20.94HgAffx.3203.1.A1_atCK350831--3e+0At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.058.00.94GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.299.5GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.197.3GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.999.1.S1_at, orthologous to the query gene, HgAffx.16785.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6077.8ZmAffx.999.1.S1_atAt4g17440hypothetical protein LOC100279401-5e-2At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.5065.7ZmAffx.566.1.A1_atAt4g17440--2e-1At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.4658.4Zm.14107.2.A1_atAt4g17440--8e-1At3g56880VQ motif-containing proteinO.I.H.G.S.X.
0.3844.2Zm.12535.1.S1_atAt4g17440hypothetical protein LOC100278440-9e+0At5g01390DNAJ heat shock protein, putativeO.I.H.G.S.X.
0.3641.3ZmAffx.734.1.A1_atAt4g17440--1e+1At5g01670aldose reductase, putativeO.I.H.G.S.X.
0.3641.3Zm.4359.2.A1_x_atAt4g17440EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3336.0ZmAffx.224.1.A1_atAt4g17440--8e-1At5g06770KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.3336.0Zm.14784.1.A1_atAt4g17440--3e+0At3g01175-O.I.H.G.S.X.
0.3233.4Zm.13162.1.A1_atAt4g17440--9e-3At3g02040SRG3 (senescence-related gene 3)O.I.H.G.S.X.
0.3029.8Zm.9891.1.A1_atAt4g17440--1e+0At5g27290unknown proteinO.I.H.G.S.X.
0.2014.2Zm.13670.1.A1_atAt4g17440hypothetical protein LOC100276497-3e-3At5g34930arogenate dehydrogenaseO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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