Co-expression analysis

Gene ID	HgAffx.15894.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g44568: unknown protein (HF=4e-3)
Module size	6 genes
NF	0.01
%ile	8.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.75	HgAffx.15894.1.S1_at	CB280462	-	-	4e-3	At5g44568	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.91	PsAffx.C96000021_at	PsAffx.C96000021	-	-	2e-2	At4g06634	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.92	HgAffx.23882.1.S1_at	BF013967	-	-	2e-1	At1g52695	phospholipase/carboxylesterase family protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.92	HgAffx.16867.1.S1_at	CB279489	-	-	2e-1	At1g54060	ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.87	GmaAffx.91841.1.S1_x_at	CF807566	-	-	8e-28	At3g22110	PAC1	O.I.	H.G.	S.X.	Please select
-	1.4	0.93	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.4	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294428	83_2450.2J.R161P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294427	82_2447.2J.R119L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294423	79_2455.2J.R220L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294426	81_3163.2J.SLJ1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294432	87_3176.2J.SLJ3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294380	3_2464.2J.R260P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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