Co-expression analysis

Gene ID HgAffx.15832.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g41530: - (HF=6e-1)
Module size 6 genes
NF 0.07
%ile 22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.79HgAffx.15832.1.S1_atCB281162--6e-1At5g41530-O.I.H.G.S.X.
0.1923.70.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.1619.70.92HgAffx.23882.1.S1_atBF013967--2e-1At1g52695phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.0710.20.93HgAffx.16208.1.S1_atCB935526--5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.069.00.93GmaAffx.25527.1.S1_atBM525182--3e+0At4g38800ATMTN1O.I.H.G.S.X.
0.024.50.94HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
3.897.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.296.0GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.296.0GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1619391_at, orthologous to the query gene, HgAffx.15832.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.91619391_atAt5g41530mildew resistance locus o 15-3e-13At2g44110MLO15 (MILDEW RESISTANCE LOCUS O 15)O.I.H.G.S.X.
0.4868.81621941_atAt5g41530--4e-1At1g31140agl63 (AGAMOUS-LIKE 63)O.I.H.G.S.X.
0.3345.71614391_atAt5g41530hypothetical protein LOC100247283-4e-8At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2734.01619487_atAt5g41530hypothetical protein LOC100262774-3e-1At1g80040unknown proteinO.I.H.G.S.X.
0.2124.01617666_a_atAt5g41530hypothetical protein LOC100260025-6e-2At5g54360zinc finger (C2H2 type) family protein-relatedO.I.H.G.S.X.
0.2022.41620602_atAt5g41530hypothetical protein LOC100250131-2e-47At5g01960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1616.71619037_atAt5g41530hypothetical protein LOC100245637-1e+0At5g23320ATSTE14A (ARABIDOPSIS HOMOLOG OF YEAST STE14 A)O.I.H.G.S.X.
0.1515.61618811_atAt5g41530hypothetical protein LOC100243112-3e-11At1g11240unknown proteinO.I.H.G.S.X.
0.1414.41617957_a_atAt5g41530hypothetical protein LOC100261868-8e-17At4g05000VPS28-2O.I.H.G.S.X.
0.1313.31612495_atAt5g41530hypothetical protein LOC100254598-1e-13At5g45350proline-rich family proteinO.I.H.G.S.X.
0.1010.31610645_atAt5g41530hypothetical protein LOC100251896-2e-13At1g61620phosphoinositide bindingO.I.H.G.S.X.
0.088.51622559_atAt5g41530hypothetical LOC100244512-9e-22At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)O.I.H.G.S.X.
0.077.81612370_atAt5g41530hypothetical protein LOC100252199-1e-46At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.077.81612191_atAt5g41530hypothetical protein LOC100247661-2e-52At3g53090UPL7O.I.H.G.S.X.
0.056.01618613_atAt5g41530hypothetical protein LOC100245552-6e-7At2g35510SRO1 (SIMILAR TO RCD ONE 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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