Co-expression analysis

Gene ID HgAffx.15832.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g41530: - (HF=6e-1)
Module size 6 genes
NF 0.07
%ile 22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.79HgAffx.15832.1.S1_atCB281162--6e-1At5g41530-O.I.H.G.S.X.
0.1923.70.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.1619.70.92HgAffx.23882.1.S1_atBF013967--2e-1At1g52695phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.0710.20.93HgAffx.16208.1.S1_atCB935526--5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.069.00.93GmaAffx.25527.1.S1_atBM525182--3e+0At4g38800ATMTN1O.I.H.G.S.X.
0.024.50.94HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
3.897.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.296.0GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.296.0GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig10545_at, orthologous to the query gene, HgAffx.15832.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8494.3Contig10545_atAt5g41530--3e+0At5g53720RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.6279.1Contig14094_atAt5g41530--1e+0At5g55135unknown proteinO.I.H.G.S.X.
0.4762.2rbags14j23_s_atAt5g41530--6e-1At3g53668CPuORF51 (Conserved peptide upstream open reading frame 51)O.I.H.G.S.X.
0.4458.9Contig12805_atAt5g41530--1e-1At5g19540unknown proteinO.I.H.G.S.X.
0.4053.1Contig7247_atAt5g41530--1e+0At5g03545unknown proteinO.I.H.G.S.X.
0.4053.1Contig8967_atAt5g41530--8e-62At3g27925DEGP1 (DegP protease 1)O.I.H.G.S.X.
0.4053.1Contig10932_atAt5g41530--8e-15At4g27745-O.I.H.G.S.X.
0.3849.5Contig3276_s_atAt5g41530CesA2 protein-2e-2At4g28890protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.H.G.S.X.
0.3647.1Contig1192_s_atAt5g41530--7e-29At4g38970fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.3545.1Contig14007_atAt5g41530--2e-1At2g17780MCA2 (mid1-complementing activity 2)O.I.H.G.S.X.
0.3545.1Contig23795_atAt5g41530--1e+1At5g49220unknown proteinO.I.H.G.S.X.
0.3443.6Contig19168_atAt5g41530--7e+0At5g48710ubiquitin-relatedO.I.H.G.S.X.
0.3342.6HVSMEc0012C08r2_atAt5g41530--8e-1At1g57540unknown proteinO.I.H.G.S.X.
0.1919.6Contig4593_atAt5g41530--9e-10At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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