Co-expression analysis

Gene ID HgAffx.13651.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g37610: voltage-gated anion channel (HF=1e+1)
Module size 6 genes
NF 0.01
%ile 7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.85HgAffx.13651.1.S1_atCB374331--1e+1At5g37610voltage-gated anion channelO.I.H.G.S.X.
0.2735.70.93HgAffx.8369.1.S1_atCB380132--9e-1At5g67000DNA binding / transcription factorO.I.H.G.S.X.
0.2430.90.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.0710.20.93Gma.13975.1.A1_atCD412131--3e+0At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.035.80.94GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
-1.40.93HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.697.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1619141_at, orthologous to the query gene, HgAffx.13651.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6384.31619141_atAt5g37610--2e-1At5g42655-O.I.H.G.S.X.
0.7390.81613718_s_atAt5g37610hypothetical protein LOC100241422-7e+0At5g11120unknown proteinO.I.H.G.S.X.
0.7289.71620509_atAt5g37610hypothetical protein LOC100248585-2e-21At4g39220ATRER1AO.I.H.G.S.X.
0.6787.91614948_atAt5g37610hypothetical protein LOC100265775-6e-61At4g35360pantothenate kinase family proteinO.I.H.G.S.X.
0.6183.21621653_s_atAt5g37610hypothetical protein LOC100261248-4e-17At5g25757unknown proteinO.I.H.G.S.X.
0.6081.91622052_s_atAt5g37610hypothetical protein LOC100248585-2e-21At4g39220ATRER1AO.I.H.G.S.X.
0.5779.81607847_atAt5g37610--6e-50At2g32170-O.I.H.G.S.X.
0.5577.31611308_atAt5g37610hypothetical protein LOC100248182-6e-4At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.
0.4868.81619577_atAt5g37610hypothetical protein LOC100266782-1e+0At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)O.I.H.G.S.X.
0.4361.51612915_atAt5g37610hypothetical protein LOC100247677-8e-115At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.
0.4158.71611281_atAt5g37610hypothetical protein LOC100245241-2e+0At5g50080DNA binding / transcription factorO.I.H.G.S.X.
0.3446.81619474_s_atAt5g37610hypothetical protein LOC100262863-3e-5At5g56600PRF3 (PROFILIN 3)O.I.H.G.S.X.
0.2428.71615783_s_atAt5g37610hypothetical protein LOC100248438-2e-19At2g40060protein binding / structural moleculeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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