Co-expression analysis

Gene ID HgAffx.13651.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g37610: voltage-gated anion channel (HF=1e+1)
Module size 6 genes
NF 0.01
%ile 7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.85HgAffx.13651.1.S1_atCB374331--1e+1At5g37610voltage-gated anion channelO.I.H.G.S.X.
0.2735.70.93HgAffx.8369.1.S1_atCB380132--9e-1At5g67000DNA binding / transcription factorO.I.H.G.S.X.
0.2430.90.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.0710.20.93Gma.13975.1.A1_atCD412131--3e+0At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.035.80.94GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
-1.40.93HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.697.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.108526.1.S1_at, orthologous to the query gene, HgAffx.13651.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5374.9TaAffx.108526.1.S1_atAt5g37610--4e+0At5g54745DegP protease familyO.I.H.G.S.X.
0.5072.4TaAffx.108295.1.S1_s_atAt5g37610--1e+0At5g46020unknown proteinO.I.H.G.S.X.
0.4464.5Ta.7766.2.S1_a_atAt5g37610--4e-1At5g44570unknown proteinO.I.H.G.S.X.
0.3854.7Ta.7766.1.S1_x_atAt5g37610--8e+0At2g37950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3346.9TaAffx.99374.1.S1_atAt5g37610--2e-2At1g17330metal-dependent phosphohydrolase HD domain-containing protein-relatedO.I.H.G.S.X.
0.1314.6TaAffx.28570.1.S1_atAt5g37610--2e-1At1g78995unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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