Co-expression analysis

Gene ID HgAffx.13651.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g37610: voltage-gated anion channel (HF=1e+1)
Module size 6 genes
NF 0.01
%ile 7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.85HgAffx.13651.1.S1_atCB374331--1e+1At5g37610voltage-gated anion channelO.I.H.G.S.X.
0.2735.70.93HgAffx.8369.1.S1_atCB380132--9e-1At5g67000DNA binding / transcription factorO.I.H.G.S.X.
0.2430.90.93PsAffx.psHB012xG08f_atPsAffx.psHB012xG08f--2e-1At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.0710.20.93Gma.13975.1.A1_atCD412131--3e+0At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.035.80.94GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
-1.40.93HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.697.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.57011.1.A1_at, orthologous to the query gene, HgAffx.13651.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7594.1PtpAffx.57011.1.A1_atAt5g37610--4e+0At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)O.I.H.G.S.X.
0.3052.0Ptp.7508.1.S1_atAt5g37610--4e+0At2g16668unknown proteinO.I.H.G.S.X.
0.2950.5PtpAffx.209070.1.S1_atAt5g37610hypothetical protein-2e-177At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)O.I.H.G.S.X.
0.2747.1PtpAffx.204063.1.S1_atAt5g37610hypothetical protein-2e-1At3g62180invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2645.2PtpAffx.206326.1.S1_atAt5g37610hypothetical protein-4e-1At4g12960gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinO.I.H.G.S.X.
0.2543.6PtpAffx.25192.1.A1_atAt5g37610hypothetical protein-1e+0At3g23350-O.I.H.G.S.X.
0.2441.8PtpAffx.200481.1.S1_atAt5g37610hypothetical protein-1e+0At1g27590-O.I.H.G.S.X.
0.2340.5PtpAffx.15982.1.S1_atAt5g37610--4e+0At5g65420CYCD4O.I.H.G.S.X.
0.2340.5PtpAffx.218518.1.S1_atAt5g37610hypothetical protein-3e-1At5g50012CPuORF36 (Conserved peptide upstream open reading frame 36)O.I.H.G.S.X.
0.2034.6PtpAffx.205748.1.S1_atAt5g37610hypothetical protein-2e-8At2g42410ZFP11 (ZINC FINGER PROTEIN 11)O.I.H.G.S.X.
0.1932.7PtpAffx.217106.1.S1_x_atAt5g37610hypothetical protein-6e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyO.I.H.G.S.X.
0.1932.7Ptp.7297.1.S1_atAt5g37610--1e+0At5g53110-O.I.H.G.S.X.
0.1729.1PtpAffx.201356.1.S1_atAt5g37610hypothetical protein-8e-9At3g14750unknown proteinO.I.H.G.S.X.
0.1729.1PtpAffx.222745.1.S1_atAt5g37610hypothetical protein-2e+0At5g27720emb1644 (embryo defective 1644)O.I.H.G.S.X.
0.1525.3PtpAffx.63315.1.A1_atAt5g37610hypothetical protein-1e-4At2g29560enolase, putativeO.I.H.G.S.X.
0.1525.3PtpAffx.210860.1.S1_atAt5g37610hypothetical protein-1e+0At3g25920RPL15O.I.H.G.S.X.
0.1423.5PtpAffx.52287.1.A1_atAt5g37610hypothetical protein-1e-5At3g13930dihydrolipoamide S-acetyltransferase, putativeO.I.H.G.S.X.
0.1423.5PtpAffx.204953.1.S1_atAt5g37610hypothetical protein-1e-2At1g59720CRR28 (CHLORORESPIRATORY REDUCTION28)O.I.H.G.S.X.
0.1321.6PtpAffx.146898.1.A1_atAt5g37610calcium dependent protein kinase 14 /// hypothetical protein-2e+0At3g59500integral membrane HRF1 family proteinO.I.H.G.S.X.
0.1219.6PtpAffx.24341.1.A1_atAt5g37610--2e+0At4g21216unknown proteinO.I.H.G.S.X.
0.1016.3PtpAffx.214709.1.S1_atAt5g37610hypothetical protein-9e-1At4g32120galactosyltransferase family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.203178.1.S1_atAt5g37610--3e-1At1g14010emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.20192.1.A1_atAt5g37610--6e+0At3g51730saposin B domain-containing proteinO.I.H.G.S.X.
0.0914.6PtpAffx.213927.1.S1_atAt5g37610hypothetical protein-6e+0At5g16940carbon-sulfur lyaseO.I.H.G.S.X.
0.0812.9PtpAffx.95403.1.A1_atAt5g37610hypothetical protein-2e+0At4g17580Bax inhibitor-1 family protein / BI-1 family proteinO.I.H.G.S.X.
0.0711.6PtpAffx.217758.1.S1_s_atAt5g37610hypothetical protein-5e-3At5g08150unknown proteinO.I.H.G.S.X.
0.0711.6Ptp.7102.1.A1_atAt5g37610hypothetical protein-2e+0At3g23180-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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