Co-expression analysis

Gene ID HZ49F08r_at
Gene name
Homology with ArabidopsisSimilar to At4g00893: - (HF=4e+0)
Module size 15 genes
NF 0.33
%ile 43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.82HZ49F08r_atHZ49F08r--4e+0At4g00893-O.I.H.G.S.X.
0.6077.30.86HY10B09u_s_atHY10B09u--3e+0At4g00893-O.I.H.G.S.X.
0.5470.30.88EBro02_SQ006_O21_s_atEBro02_SQ006_O21--1e-2At4g10810unknown proteinO.I.H.G.S.X.
0.4053.10.91Contig6587_s_atContig6587--1e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.3342.60.87Contig142_atContig142--1e-24At5g59690histone H4O.I.H.G.S.X.
0.3240.30.87Contig24888_atContig24888--1e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3138.60.90Contig17047_atContig17047--2e+0At3g13440methyltransferase/ nucleic acid bindingO.I.H.G.S.X.
0.3037.00.90Contig18444_atContig18444--2e+0At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)O.I.H.G.S.X.
0.3037.00.90Contig2750_s_atContig2750--4e-15At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)O.I.H.G.S.X.
0.2935.50.90HV08O06r_atHV08O06r--1e+0At2g23945chloroplast nucleoid DNA-binding protein-relatedO.I.H.G.S.X.
0.2935.50.93rbags16i08_s_atrbags16i08--8e-1At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)O.I.H.G.S.X.
0.2528.90.90Contig18440_atContig18440--2e+0At3g56590hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2122.60.87Contig10728_atContig10728--4e+0At5g04520unknown proteinO.I.H.G.S.X.
0.1615.30.86rbags1c09_atrbags1c09--5e+0At2g04420nucleic acid bindingO.I.H.G.S.X.
0.1412.90.87Contig13931_atContig13931--2e+0At5g47080CKB1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.2GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.995.8GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM372952genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM372949genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.093.8GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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