Co-expression analysis

Gene ID HY10H19u_s_at
Gene name
Homology with ArabidopsisSimilar to At5g54740: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=5e+0)
Module size 6 genes
NF 0.87
%ile 98.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.93HY10H19u_s_atHY10H19u--5e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.8394.00.92Contig3257_atContig3257--2e+0At3g51030ATTRX1O.I.H.G.S.X.
0.8092.50.92Contig22653_atContig22653--1e+0At4g14380unknown proteinO.I.H.G.S.X.
0.8092.50.92Contig4756_atContig4756--2e-75At2g24270ALDH11A3O.I.H.G.S.X.
0.8092.50.92Contig17469_atContig17469--2e+0At5g56795MT1BO.I.H.G.S.X.
0.5066.90.93Contig10560_atContig10560--5e-1At3g27010AT-TCP20O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.9GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
29.499.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
10.199.1GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
8.198.7GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
8.098.7GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
6.898.3GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.897.0GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.596.7GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
4.196.2GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage