Co-expression analysis

Gene ID	HY10H16u_x_at
Gene name
Homology with Arabidopsis	Similar to At5g44500: small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative (HF=3e+0)
Module size	6 genes
NF	0.01
%ile	1.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.72	HY10H16u_x_at	HY10H16u	-	-	3e+0	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.89	Contig22709_at	Contig22709	-	-	6e+0	At5g06790	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.92	Contig7306_at	Contig7306	-	-	1e+0	At3g17820	ATGSKB6	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.88	rbags20j15_s_at	rbags20j15	-	-	1e+0	At2g02230	AtPP2-B1 (Phloem protein 2-B1)	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.78	Contig3950_at	Contig3950	-	-	3e-1	At5g56190	WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.89	HW09F23V_s_at	HW09F23V	-	-	3e+0	At4g10240	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.7	99.9	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
28.3	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.0	99.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.8	95.7	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.2	94.3	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM261057	Xantha b-12 Cotrol rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM261053	Bonus Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.7	92.7	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.7	92.7	GSM373002	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.6	92.3	GSM261078	Albina e-16 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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