Co-expression analysis

Gene ID HY04I22u_at
Gene name
Homology with ArabidopsisSimilar to At4g10430: - (HF=4e+0)
Module size 6 genes
NF 0.13
%ile 16.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4661.00.88HY04I22u_atHY04I22u--4e+0At4g10430-O.I.H.G.S.X.
0.2021.10.89HY04C04u_atHY04C04u--7e-1At1g09490cinnamyl-alcohol dehydrogenase family / CAD familyO.I.H.G.S.X.
0.1716.90.88HK03G05u_x_atHK03G05u--7e-1At2g03750sulfotransferase family proteinO.I.H.G.S.X.
0.1514.10.88HV04B24u_atHV04B24u--2e+1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.086.50.87HT07O11u_x_atHT07O11u--3e+0At1g01570fringe-related proteinO.I.H.G.S.X.
0.054.10.87HF08O15r_atHF08O15r--9e+0At4g23090unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.199.6GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
15.399.6GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.198.4GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.698.2GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.897.8GSM398254Martin_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.797.7GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.197.3GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.596.7GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM372956genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.956.1.A1_at, orthologous to the query gene, HY04I22u_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5571.6ZmAffx.956.1.A1_atAt4g10430--8e-1At1g08580unknown proteinO.I.H.G.S.X.
0.7188.2Zm.16316.1.A1_atAt4g10430ATP binding protein-2e-1At5g19210DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6785.8Zm.15669.1.S1_atAt4g10430plant-specific domain TIGR01570 family protein-1e-4At3g25640unknown proteinO.I.H.G.S.X.
0.6179.5ZmAffx.525.1.A1_atAt4g10430--8e-1At5g23170protein kinase family proteinO.I.H.G.S.X.
0.5571.6Zm.18038.1.S1_atAt4g10430--2e+1At5g66700HB53O.I.H.G.S.X.
0.4556.4Zm.1134.1.A1_atAt4g10430hypothetical protein LOC100193278-3e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4556.4Zm.5070.1.A1_atAt4g10430hypothetical protein LOC100193023-2e-16At1g22950iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.4149.7Zm.5313.2.A1_atAt4g1043060S ribosomal protein L12-9e-9At2g3719060S ribosomal protein L12 (RPL12A)O.I.H.G.S.X.
0.3945.6Zm.5230.1.A1_atAt4g10430acyl-desaturase-2e-17At2g43710SSI2O.I.H.G.S.X.
0.3945.6Zm.11338.1.A1_atAt4g10430hypothetical protein LOC100274516-3e-6At2g40190glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.3233.4Zm.6555.2.S1_atAt4g10430hypothetical protein LOC100273907-1e-31At3g11710ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)O.I.H.G.S.X.
0.2115.5Zm.9354.1.A1_atAt4g10430--1e+0At2g28330unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage