Co-expression analysis

Gene ID HY03L11u_at
Gene name
Homology with ArabidopsisSimilar to At2g28820: - (HF=9e-1)
Module size 17 genes
NF 0.22
%ile 27.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.90HY03L11u_atHY03L11u--9e-1At2g28820-O.I.H.G.S.X.
0.2835.50.93Contig10020_atContig10020--3e-5At1g29810dehydratase familyO.I.H.G.S.X.
0.2732.10.96Contig13507_atContig13507--2e+0At4g24370unknown proteinO.I.H.G.S.X.
0.2427.20.95Contig8538_atContig8538--4e-2At2g04038AtbZIP48 (Arabidopsis thaliana basic leucine-zipper 48)O.I.H.G.S.X.
0.2427.20.94Contig514_s_atContig514ribosome-inactivating protein-5e-4At5g15265unknown proteinO.I.H.G.S.X.
0.2224.20.94Contig8884_atContig8884--3e-3At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.H.G.S.X.
0.2224.20.94Contig5879_atContig5879--8e-1At4g35630PSATO.I.H.G.S.X.
0.2122.60.96Contig14462_atContig14462--1e+0At4g00670DNA bindingO.I.H.G.S.X.
0.2122.60.97rbaal22l07_s_atrbaal22l07vacuolar ATPase B subunit-1e-1At3g44100MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.2122.60.94Contig9862_atContig9862--1e+0At1g38630unknown proteinO.I.H.G.S.X.
0.2021.10.97Contig24657_atContig24657--2e-2At5g18940Mo25 family proteinO.I.H.G.S.X.
0.1615.30.94Contig12587_atContig12587--4e-1At5g64530XND1O.I.H.G.S.X.
0.1514.10.97Contig4072_atContig4072--2e+0At2g3161040S ribosomal protein S3 (RPS3A)O.I.H.G.S.X.
0.1412.90.95Contig16299_atContig16299--2e+0At3g55960NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.1311.60.94HB04L12r_atHB04L12r--4e+0At5g55360long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.119.40.95Contig19553_atContig19553--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)O.I.H.G.S.X.
0.119.40.94HY08H20u_s_atHY08H20u--8e-1At3g5517060S ribosomal protein L35 (RPL35C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.198.4GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
6.498.1GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.398.1GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.997.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.197.3GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.696.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.196.2GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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