Co-expression analysis

Gene ID HY03E10u_s_at
Gene name
Homology with ArabidopsisSimilar to At5g63060: transporter (HF=1e+1)
Module size 6 genes
NF 0.72
%ile 92.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.97HY03E10u_s_atHY03E10u--1e+1At5g63060transporterO.I.H.G.S.X.
0.8092.50.97Contig1139_s_atContig1139--1e-19At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.6784.70.97Contig20455_atContig20455--2e+0At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.6077.30.97Contig13274_atContig13274--9e-3At1g71690unknown proteinO.I.H.G.S.X.
0.4458.90.97Contig18744_atContig18744--2e+0At5g41630F-box family proteinO.I.H.G.S.X.
0.4053.10.97Contig9290_atContig9290--5e-15At1g62020coatomer protein complex, subunit alpha, putativeO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7187.10.95HY02L18u_atHY02L18u--4e+0At5g14920gibberellin-regulated family proteinO.I.H.G.S.X.
0.6784.70.94Contig16047_atContig16047--5e-6At4g16060unknown proteinO.I.H.G.S.X.
0.6784.70.94Contig9103_atContig9103--2e-1At3g13410unknown proteinO.I.H.G.S.X.
0.6784.70.94Contig22145_atContig22145--7e+0At4g10260pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.6784.70.96Contig22516_atContig22516--4e-1At1g51300acyl-protein thioesterase-relatedO.I.H.G.S.X.
0.6178.70.94Contig18367_atContig18367--2e+0At2g15170-O.I.H.G.S.X.
0.6178.70.96Contig20823_s_atContig20823--3e-1At1g16730unknown proteinO.I.H.G.S.X.
0.6178.70.96Contig26597_atContig26597--9e-2At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.6178.70.96Contig20206_atContig20206--6e-3At1g73010phosphataseO.I.H.G.S.X.
0.6077.30.93HVSMEf0017F17r2_atHVSMEf0017F17r2--3e+0At4g36470S-adenosyl-L-methionine:carboxyl methyltransferase family proteinO.I.H.G.S.X.
0.6077.30.94Contig1707_atContig1707--5e-9At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.H.G.S.X.
0.6077.30.94Contig9092_atContig9092--3e-2At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.6077.30.96Contig20626_atContig20626--4e+0At5g58240bis(5'-adenosyl)-triphosphatase, putativeO.I.H.G.S.X.
0.6077.30.96Contig8495_atContig8495--2e-5At2g24740SDG21 (SET DOMAIN GROUP 21)O.I.H.G.S.X.
0.5572.00.95Contig20448_atContig20448--2e-6At4g39010AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)O.I.H.G.S.X.
0.5572.00.96Contig23074_atContig23074--4e+0At4g17870-O.I.H.G.S.X.
0.5369.70.95HVSMEf0002J15r2_s_atHVSMEf0002J15r2--9e-19At5g44340TUB4O.I.H.G.S.X.
0.5369.70.95Contig7805_atContig7805--3e+0At4g15120VQ motif-containing proteinO.I.H.G.S.X.
0.5066.90.93Contig23029_atContig23029--8e-2At1g73700MATE efflux family proteinO.I.H.G.S.X.
0.5066.90.94Contig15122_atContig15122--3e+0At3g58910F-box family proteinO.I.H.G.S.X.
0.5066.90.95Contig25555_atContig25555--4e+0At2g17695unknown proteinO.I.H.G.S.X.
0.5066.90.95Contig15430_atContig15430--1e-14At3g085902,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putativeO.I.H.G.S.X.
0.5066.90.95Contig22623_atContig22623--5e-3At5g20400oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.5066.90.95HV_CEb0006G02r2_atHV_CEb0006G02r2--2e+1At1g04550IAA12 (AUXIN-INDUCED PROTEIN 12)O.I.H.G.S.X.
0.5066.90.96Contig19304_atContig19304--3e+0At3g56520no apical meristem (NAM) family proteinO.I.H.G.S.X.
0.5066.90.96Contig16296_atContig16296--6e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.H.G.S.X.
0.5066.90.96HT09B14u_s_atHT09B14u--3e+0At3g55580regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.
0.5066.90.96Contig17597_atContig17597--6e+0At5g61100-O.I.H.G.S.X.
0.5066.90.96Contig19923_atContig19923--3e-1At4g26950unknown proteinO.I.H.G.S.X.
0.5066.90.97Contig1434_s_atContig1434--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.5066.90.97Contig7911_atContig7911--2e-4At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4661.00.95HA10P09u_atHA10P09u--2e-2At2g10965unknown proteinO.I.H.G.S.X.
0.4661.00.96HT05P07u_s_atHT05P07u--3e+0At1g32585VQ motif-containing protein-relatedO.I.H.G.S.X.
0.4661.00.96HU05N01u_atHU05N01u--1e+0At5g19830aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.4661.00.96Contig14264_atContig14264--2e+0At1g48780unknown proteinO.I.H.G.S.X.
0.4458.90.93Contig16120_atContig16120--4e-7At5g01310basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4458.90.94Contig24849_atContig24849--9e-2At3g06600unknown proteinO.I.H.G.S.X.
0.4458.90.95Contig1193_atContig1193--2e-2At1g01520myb family transcription factorO.I.H.G.S.X.
0.4458.90.95HW04K16u_atHW04K16u--4e+0At3g43930-O.I.H.G.S.X.
0.4255.20.93HV08D10u_atHV08D10u--9e-1At2g01818zinc ion bindingO.I.H.G.S.X.
0.4053.10.94Contig17838_atContig17838--5e-1At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.H.G.S.X.
0.4053.10.94Contig3065_x_atContig3065--1e+1At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4053.10.95rbags19i06_atrbags19i06--2e-17At5g05920DHS (DEOXYHYPUSINE SYNTHASE)O.I.H.G.S.X.
0.4053.10.96Contig20154_atContig20154--2e-2At1g16440kinaseO.I.H.G.S.X.
0.4053.10.96Contig255_atContig255--4e+0At3g53670unknown proteinO.I.H.G.S.X.
0.4053.10.96HT10K14u_atHT10K14u--1e-6At1g09230RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3849.50.94Contig10524_s_atContig10524--1e+0At5g28360ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE)O.I.H.G.S.X.
0.3849.50.95HY09B17u_atHY09B17u--4e+0At4g01110-O.I.H.G.S.X.
0.3849.50.96Contig19776_atContig19776--1e+0At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.3647.10.94Contig15114_atContig15114--1e-1At1g07870protein kinase family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.999.6GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
11.099.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
8.798.9GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.998.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
5.997.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.197.3GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.696.8GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.496.6GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.396.4GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.196.2GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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