Co-expression analysis

Gene ID HY03E10u_s_at
Gene name
Homology with ArabidopsisSimilar to At5g63060: transporter (HF=1e+1)
Module size 6 genes
NF 0.72
%ile 92.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.97HY03E10u_s_atHY03E10u--1e+1At5g63060transporterO.I.H.G.S.X.
0.8092.50.97Contig1139_s_atContig1139--1e-19At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.6784.70.97Contig20455_atContig20455--2e+0At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.6077.30.97Contig13274_atContig13274--9e-3At1g71690unknown proteinO.I.H.G.S.X.
0.4458.90.97Contig18744_atContig18744--2e+0At5g41630F-box family proteinO.I.H.G.S.X.
0.4053.10.97Contig9290_atContig9290--5e-15At1g62020coatomer protein complex, subunit alpha, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.999.6GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
11.099.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
8.798.9GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.998.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
5.997.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.197.3GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.696.8GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.496.6GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.396.4GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.196.2GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.82204.3.S1_at, orthologous to the query gene, HY03E10u_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6GmaAffx.82204.3.S1_atAt5g63060--8e-1At4g08485-O.I.H.G.S.X.
0.047.0GmaAffx.74953.1.S1_atAt5g63060--5e+0At5g20885zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.024.5Gma.12318.1.S1_atAt5g63060--7e+0Atmg01120-O.I.H.G.S.X.
0.013.4PsAffx.psHB019xC03f_s_atAt5g63060--2e-2At4g16190cysteine proteinase, putativeO.I.H.G.S.X.
0.013.4GmaAffx.37803.2.S1_atAt5g63060--2e-1At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.001.4Gma.5200.4.S1_atAt5g63060--2e-72At3g08930-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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