Co-expression analysis

Gene ID	HX05P09r_at
Gene name
Homology with Arabidopsis	Similar to At5g60350: unknown protein (HF=9e-1)
Module size	7 genes
NF	0.67
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.87	HX05P09r_at	HX05P09r	-	-	9e-1	At5g60350	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.90	Contig17982_at	Contig17982	-	-	2e+1	At5g05340	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.75	89.5	0.89	HA07k01r_at	HA07k01r	-	-	1e+0	At3g48640	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	0.88	Contig2339_at	Contig2339	-	-	5e-12	At4g15000	60S ribosomal protein L27 (RPL27C)	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.88	Contig9561_at	Contig9561	-	-	1e+1	At4g15780	ATVAMP724	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.92	Contig17012_at	Contig17012	-	-	2e+0	At2g01275	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.92	Contig12675_s_at	Contig12675	-	-	1e+0	At4g28150	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
44.4	99.9	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
13.7	99.5	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.2	98.0	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.1	97.3	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.8	97.0	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.9	95.8	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.8	95.7	GSM373003	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.7	95.5	GSM71140	OWB-D stress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.5	95.1	GSM71141	OWB-D stress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.5	95.1	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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