Co-expression analysis

Gene ID	HW07N20u_at
Gene name
Homology with Arabidopsis	Similar to At2g13272: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.20
%ile	25.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	72.0	0.81	HW07N20u_at	HW07N20u	-	-	3e+0	At2g13272	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.85	HT07M09u_at	HT07M09u	-	-	2e-1	At2g24625	-	O.I.	H.G.	S.X.	Please select
0.37	47.9	0.84	HVSMEl0009L02r2_at	HVSMEl0009L02r2	-	-	8e-2	At5g55970	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.84	Contig2464_at	Contig2464	vacuolar ATPase B subunit	-	2e-156	At1g20260	hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.84	Contig6226_at	Contig6226	-	-	3e-14	At3g20390	endoribonuclease L-PSP family protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.84	Contig1269_s_at	Contig1269	S-adenosylmethionine synthetase	-	2e-84	At3g17390	MTO3 (METHIONINE OVER-ACCUMULATOR 3)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.1	98.7	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.5	98.2	GSM419974	Lemma_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.5	98.2	GSM440959	Control lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
6.2	98.0	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.2	98.0	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
6.0	97.9	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.2	97.4	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.1	97.3	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.9	97.1	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.2	96.3	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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