Co-expression analysis

Gene ID HW07N20u_at
Gene name
Homology with ArabidopsisSimilar to At2g13272: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.20
%ile 25.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.81HW07N20u_atHW07N20u--3e+0At2g13272unknown proteinO.I.H.G.S.X.
0.4356.40.85HT07M09u_atHT07M09u--2e-1At2g24625-O.I.H.G.S.X.
0.3747.90.84HVSMEl0009L02r2_atHVSMEl0009L02r2--8e-2At5g55970zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2224.20.84Contig2464_atContig2464vacuolar ATPase B subunit-2e-156At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.
0.119.40.84Contig6226_atContig6226--3e-14At3g20390endoribonuclease L-PSP family proteinO.I.H.G.S.X.
0.108.40.84Contig1269_s_atContig1269S-adenosylmethionine synthetase-2e-84At3g17390MTO3 (METHIONINE OVER-ACCUMULATOR 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
6.598.2GSM419974Lemma_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.598.2GSM440959Control lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.298.0GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.298.0GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.097.9GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.297.4GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.197.3GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.997.1GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.296.3GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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