Co-expression analysis

Gene ID HW06I17u_at
Gene name
Homology with ArabidopsisSimilar to At2g46860: AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3) (HF=4e-9)
Module size 13 genes
NF 0.40
%ile 54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.77HW06I17u_atHW06I17u--4e-9At2g46860AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3)O.I.H.G.S.X.
0.5572.00.86Contig9481_atContig9481--2e+0At5g60830AtbZIP70 (Arabidopsis thaliana basic leucine-zipper 70)O.I.H.G.S.X.
0.5369.70.87Contig18600_atContig18600--8e-5At1g72520lipoxygenase, putativeO.I.H.G.S.X.
0.5268.30.87Contig8940_s_atContig8940--2e-3At3g02000ROXY1O.I.H.G.S.X.
0.4458.90.88HW03D17u_atHW03D17u--4e+0At5g65300unknown proteinO.I.H.G.S.X.
0.4153.90.88Contig6572_atContig6572--8e-1At5g07100WRKY26O.I.H.G.S.X.
0.4053.10.88Contig23957_atContig23957--1e-6At2g40690GLY1O.I.H.G.S.X.
0.3342.60.88Contig7447_atContig7447--2e-7At4g10790UBX domain-containing proteinO.I.H.G.S.X.
0.3138.60.81Contig1221_s_atContig1221--5e+0At5g19140AILP1O.I.H.G.S.X.
0.3037.00.85HVSMEa0003J04r2_s_atHVSMEa0003J04r2--1e-1At2g01260unknown proteinO.I.H.G.S.X.
0.3037.00.87Contig12297_atContig12297--1e+0At3g13190myosin heavy chain-relatedO.I.H.G.S.X.
0.2326.10.88HB22L02r_atHB22L02r--1e+0At1g44770unknown proteinO.I.H.G.S.X.
0.1919.60.88Contig10000_atContig10000--8e+0At5g05113unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.598.2GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.097.9GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.097.9GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.897.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.995.8GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.995.8GSM261057Xantha b-12 Cotrol rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.695.3GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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