Co-expression analysis

Gene ID	HW05K01u_at
Gene name
Homology with Arabidopsis	Similar to At3g15150: zinc ion binding (HF=9e-1)
Module size	6 genes
NF	0.38
%ile	52.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.96	HW05K01u_at	HW05K01u	-	-	9e-1	At3g15150	zinc ion binding	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.96	Contig19576_x_at	Contig19576	-	-	5e-1	At2g29910	F-box family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.96	Contig16630_at	Contig16630	-	-	1e+0	At1g31250	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.96	Contig1188_s_at	Contig1188	amylase/protease inhibitor	-	6e+0	At5g05120	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.96	EBem05_SQ003_O06_at	EBem05_SQ003_O06	-	-	1e+0	At2g17380	AP19	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.96	Contig16579_at	Contig16579	-	-	2e+0	At4g14695	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.0	99.8	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
18.5	99.7	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
17.9	99.7	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
12.1	99.3	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.8	98.6	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
7.2	98.5	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.8	97.8	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.0	97.2	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.8	97.0	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.3	96.4	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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