Co-expression analysis

Gene ID HW03O03u_at
Gene name
Homology with ArabidopsisSimilar to At1g02410: cytochrome c oxidase assembly protein CtaG / Cox11 family (HF=2e-32)
Module size 6 genes
NF 0.02
%ile 2.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.89HW03O03u_atHW03O03u--2e-32At1g02410cytochrome c oxidase assembly protein CtaG / Cox11 familyO.I.H.G.S.X. protein, putativeO.I.H.G.S.X. (METHYL-CPG-BINDING DOMAIN PROTEIN 02)O.I.H.G.S.X. proteinO.I.H.G.S.X. proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
5.897.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.597.6GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
4.997.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
4.396.4GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.294.3GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.993.4GSM3634655 mM B(OH)3 treatment (5B) - rep3GSE14521Late response to boron toxicity in barley leavesLink to GEO
2.993.4GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage