Co-expression analysis

Gene ID	HW02P03u_x_at
Gene name
Homology with Arabidopsis	Similar to At3g12510: unknown protein (HF=5e-2)
Module size	9 genes
NF	0.03
%ile	3.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.72	HW02P03u_x_at	HW02P03u	-	-	5e-2	At3g12510	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.73	EBro08_SQ008_B19_at	EBro08_SQ008_B19	-	-	3e+0	At5g19200	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.12	10.4	0.75	Contig22156_at	Contig22156	-	-	8e+0	At5g66880	SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3)	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.76	rbags16i08_x_at	rbags16i08	-	-	8e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.78	Contig9882_s_at	Contig9882	-	-	2e-18	At4g17050	UGLYAH (UREIDOGLYCINE AMINOHYDROLASE)	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.74	AFFX-TrpnX-M_at	AFFX-TrpnX-M	-	-			-	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.72	EBro06_SQ001_K05_at	EBro06_SQ001_K05	-	-	7e+0	At1g05770	jacalin lectin family protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.74	HS05N24u_at	HS05N24u	-	-	8e-1	At2g44390	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.74	HA03H21u_x_at	HA03H21u	-	-	3e-1	At1g19020	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.3	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.4	97.5	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.4	97.5	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.3	97.4	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
4.4	96.6	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.4	96.6	GSM213436	Barley seeds with P. aeruginosa PAO1 for 12hr	GSE8618	P. aeruginosa virulent factor to barley
4.3	96.4	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.1	96.2	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.9	95.8	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
3.7	95.5	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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