Co-expression analysis

Gene ID	HW02H12u_x_at
Gene name
Homology with Arabidopsis	Similar to At5g20440: protein binding (HF=1e+1)
Module size	8 genes
NF	0.10
%ile	12.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	98.7	0.92	HW02H12u_x_at	HW02H12u	-	-	1e+1	At5g20440	protein binding	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.95	HY03I24u_x_at	HY03I24u	-	-	6e-2	At3g25470	bacterial hemolysin-related	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.95	HA10M09u_x_at	HA10M09u	-	-	1e+1	At5g42235	Expressed protein	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.95	HC113G05_SK_at	HC113G05_SK	-	-	1e+0	At4g14342	pre-mRNA splicing factor 10 kDa subunit, putative	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.94	HU11D24u_at	HU11D24u	-	-	9e-1	At4g19840	ATPP2-A1	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.94	Contig1348_at	Contig1348	-	-	7e-31	At2g44120	60S ribosomal protein L7 (RPL7C)	O.I.	H.G.	S.X.	Please select
0.06	4.8	0.95	HVSMEh0084N15r2_s_at	HVSMEh0084N15r2	-	-	6e+0	At1g48510	cytochrome c oxidase assembly protein surfeit-related	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.93	Contig26093_at	Contig26093	-	-	3e-1	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.7	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
5.5	97.6	GSM238439	Embryo 72 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.7	96.9	GSM238437	Embryo 48 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.8	95.7	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.8	95.7	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM431569	pathogen isolates: Mock inoculated control - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.7	95.5	GSM431572	pathogen isolates: Polymyxa betae - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.6	95.3	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.6	95.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.3	94.6	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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