Co-expression analysis

Gene ID HV_CEb0021G08r2_at
Gene name
Homology with ArabidopsisSimilar to At4g04510: protein kinase family protein (HF=2e-2)
Module size 27 genes
NF 0.58
%ile 80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9398.70.95HV_CEb0021G08r2_atHV_CEb0021G08r2--2e-2At4g04510protein kinase family proteinO.I.H.G.S.X.
0.7388.70.96Contig25667_x_atContig25667--7e-1At1g24000Bet v I allergen family proteinO.I.H.G.S.X.
0.6380.30.96HVSMEm0004M18r2_atHVSMEm0004M18r2--2e+0At3g09970calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.6380.30.95Contig23664_atContig23664--1e+0At3g51080zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.6380.30.96Contig13086_s_atContig13086--8e+0At4g33040glutaredoxin family proteinO.I.H.G.S.X.
0.6178.70.97HVSMEg0002G01r2_x_atHVSMEg0002G01r2--6e+0At5g39360EDL2 (EID1-like 2)O.I.H.G.S.X.
0.6077.30.95rbaal4l02_atrbaal4l02--6e-3At5g09640SCPL19O.I.H.G.S.X.
0.5975.80.96HD03N13u_atHD03N13u--2e+1At5g42591unknown proteinO.I.H.G.S.X.
0.5975.80.95EBro08_SQ011_O23_atEBro08_SQ011_O23--1e+0At1g03430AHP5 (HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5)O.I.H.G.S.X.
0.5874.90.96HY02C19u_atHY02C19u--5e+0At4g15610integral membrane family proteinO.I.H.G.S.X.
0.5774.90.95Contig26035_atContig26035--2e+0At1g10600-O.I.H.G.S.X.
0.5774.90.96EBem04_SQ003_H15_atEBem04_SQ003_H15--3e+0At5g33806unknown proteinO.I.H.G.S.X.
0.5674.30.96HS05N06r_atHS05N06r--9e-1At1g79110protein binding / zinc ion bindingO.I.H.G.S.X.
0.5674.30.95rbaal31o11_x_atrbaal31o11--5e+0At4g31050lipoyltransferase (LIP2p)O.I.H.G.S.X.
0.5572.00.95Contig16230_atContig16230--1e+0At3g17280F-box family proteinO.I.H.G.S.X.
0.5572.00.96EBro08_SQ001_H04_atEBro08_SQ001_H04--1e+1At5g23027unknown proteinO.I.H.G.S.X.
0.5572.00.952623978_R_1403-2212_at2623978_R_1403-2212--2e+0At3g16350myb family transcription factorO.I.H.G.S.X.
0.5470.30.96EBro02_SQ008_P15_atEBro02_SQ008_P15--1e+1At5g43211unknown proteinO.I.H.G.S.X.
0.5470.30.969507414_R_4264-4644_at9507414_R_4264-4644--1e+1At5g06320NHL3O.I.H.G.S.X.
0.5369.70.95Contig12986_atContig12986--7e-13At3g28007nodulin MtN3 family proteinO.I.H.G.S.X.
0.5369.70.96HV_CEa0014H05r2_atHV_CEa0014H05r2--3e+0At5g64850unknown proteinO.I.H.G.S.X.
0.5268.30.97V00087.1_atV00087.1--3e-1At5g43525-O.I.H.G.S.X.
0.5268.30.95HT11A16u_x_atHT11A16u--2e+0At1g64080unknown proteinO.I.H.G.S.X.
0.5167.50.95HZ55F22r_atHZ55F22r--4e+0At4g18740transcription termination factorO.I.H.G.S.X.
0.5167.50.96Contig17900_atContig17900--6e+0At4g05170DNA binding / transcription factorO.I.H.G.S.X.
0.4762.20.95S0000800072B12F1_atS0000800072B12F1--9e+0At1g07476unknown proteinO.I.H.G.S.X.
0.4762.20.96HY06F24u_x_atHY06F24u--1e+1At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.9GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.596.7GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
4.396.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.096.0GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.595.1GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.294.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.294.3GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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