Co-expression analysis

Gene ID	HV_CEb0020C01r2_at
Gene name
Homology with Arabidopsis	Similar to At3g51030: ATTRX1 (HF=8e+0)
Module size	6 genes
NF	0.38
%ile	52.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.91	HV_CEb0020C01r2_at	HV_CEb0020C01r2	-	-	8e+0	At3g51030	ATTRX1	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.92	Contig5562_s_at	Contig5562	-	-	1e-3	At3g51550	FER (FERONIA)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.91	Contig15391_at	Contig15391	-	-	2e-9	At2g42280	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.92	HA24C19r_s_at	HA24C19r	-	-	2e+0	At3g52740	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.91	HV_CEb0023O21f_at	HV_CEb0023O21f	-	-	9e-1	At1g24440	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.92	Contig2616_at	Contig2616	-	-	2e+0	At5g11990	proline-rich family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.0	99.8	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
19.3	99.7	GSM419979	Awn_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
19.3	99.7	GSM440970	Control awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
17.7	99.7	GSM238415	Endosperm 8DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
9.8	99.1	GSM419980	Awn_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
9.8	99.1	GSM440971	Control awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
6.5	98.2	GSM419983	Seed_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.5	98.2	GSM440977	Control seed_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.4	97.5	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.4	97.5	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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