Co-expression analysis

Gene ID HV_CEb0016H05f2_at
Gene name
Homology with ArabidopsisSimilar to At3g29575: AFP3 (ABI FIVE BINDING PROTEIN 3) (HF=4e-1)
Module size 6 genes
NF 0.15
%ile 18.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.92HV_CEb0016H05f2_atHV_CEb0016H05f2--4e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)O.I.H.G.S.X.
0.4053.10.92Contig7010_atContig7010--3e-62At4g29510PRMT11 (ARGININE METHYLTRANSFERASE 11)O.I.H.G.S.X.
0.2224.20.92Contig15715_atContig15715--4e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.1615.30.92HV11B04u_x_atHV11B04u--6e-2At2g21250mannose 6-phosphate reductase (NADPH-dependent), putativeO.I.H.G.S.X. (SPHINGOSINE KINASE 1)O.I.H.G.S.X. (EXOCYST COMPLEX COMPONENT SEC5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.199.2GSM130804JA, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
7.998.7GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
6.898.3GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
6.298.0GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.897.8GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
5.597.6GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.197.3GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.296.3GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.096.0GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.995.8GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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