Co-expression analysis

Gene ID HV_CEb0012K14r2_x_at
Gene name
Homology with ArabidopsisSimilar to At5g19030: RNA recognition motif (RRM)-containing protein (HF=2e+0)
Module size 6 genes
NF 0.48
%ile 67.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.91HV_CEb0012K14r2_x_atHV_CEb0012K14r2--2e+0At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.8092.50.93Contig14827_s_atContig14827--3e-1At5g17050UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)O.I.H.G.S.X.
0.6784.70.90Contig21043_atContig21043--2e+0At3g14510geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeO.I.H.G.S.X.
0.6784.70.92HV05G07u_atHV05G07u--2e-1At3g59070auxin-responsive protein, putativeO.I.H.G.S.X.
0.2528.90.91HVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-O.I.H.G.S.X.
0.1716.90.91Contig25029_atContig25029--4e+0At3g48231LCR48 (Low-molecular-weight cysteine-rich 48)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
7.598.6GSM372998genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.498.1GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
5.797.7GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
5.097.2GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.696.8GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.496.6GSM373001genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.496.6GSM372999genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.396.4GSM261029ABA-Late-rep3GSE10328ABA experimentLink to GEO
4.396.4GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage