Co-expression analysis

Gene ID HV_CEa0017M22f_at
Gene name
Homology with ArabidopsisSimilar to At3g54300: ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727) (HF=1e+1)
Module size 6 genes
NF 0.58
%ile 80.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.95HV_CEa0017M22f_atHV_CEa0017M22f--1e+1At3g54300ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)O.I.H.G.S.X.
0.6784.70.93Contig7254_atContig7254--6e+0At2g17880DNAJ heat shock protein, putativeO.I.H.G.S.X.
0.5674.30.94Contig15180_atContig15180--2e-1At1g57690F-box family proteinO.I.H.G.S.X.
0.5066.90.94Contig23961_atContig23961--3e-1At4g14450unknown proteinO.I.H.G.S.X.
0.4661.00.94Contig4560_atContig4560--2e-1At1g29000heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3342.60.94Contig11462_atContig11462--8e-5At5g41770crooked neck protein, putative / cell cycle protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.8GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
7.598.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.498.1GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.398.1GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.797.7GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.697.7GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.597.6GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.497.5GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
5.097.2GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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