Co-expression analysis

Gene ID HV_CEa0012H15r2_at
Gene name
Homology with ArabidopsisSimilar to At1g11450: nodulin MtN21 family protein (HF=4e+0)
Module size 6 genes
NF 0.91
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96HV_CEa0012H15r2_atHV_CEa0012H15r2--4e+0At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.9198.10.95Contig15145_atContig15145--1e-61At3g09920PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE)O.I.H.G.S.X.
0.9198.10.96Contig9426_atContig9426--2e-2At5g51340unknown proteinO.I.H.G.S.X.
0.9198.10.96Contig21454_x_atContig21454--4e+0At4g01265raffinose synthase family protein / seed imbibition protein-relatedO.I.H.G.S.X.
0.8394.00.95Contig23898_atContig23898--4e-1At2g01610invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5774.90.96Contig21304_s_atContig21304--3e+0At5g10390histone H3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.3GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
9.699.0GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.494.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.5343.1.S1_at, orthologous to the query gene, HV_CEa0012H15r2_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.98100.0Gma.5343.1.S1_atAt1g11450--6e-1At2g04034-O.I.H.G.S.X.
0.4360.6GmaAffx.78081.1.S1_atAt1g11450--8e-1At3g20220auxin-responsive protein, putativeO.I.H.G.S.X.
0.3650.8Gma.5575.1.S1_atAt1g11450--3e-20At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.3243.7GmaAffx.5160.1.S1_atAt1g11450--6e-1At1g05720selenoprotein family proteinO.I.H.G.S.X.
0.3142.2Gma.14330.2.A1_atAt1g11450--7e-1At4g38401unknown proteinO.I.H.G.S.X.
0.3142.2Gma.10823.1.S1_a_atAt1g11450--3e-32At1g65220eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinO.I.H.G.S.X.
0.3040.4Gma.6565.1.S1_atAt1g11450--9e-17At1g16210unknown proteinO.I.H.G.S.X.
0.2633.9Gma.9648.1.S1_atAt1g11450--4e+0At3g27050unknown proteinO.I.H.G.S.X.
0.2329.9GmaAffx.5824.1.A1_s_atAt1g11450--3e+0At5g64670ribosomal protein L15 family proteinO.I.H.G.S.X.
0.2329.9Gma.15861.1.S1_atAt1g11450--1e-46At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)O.I.H.G.S.X.
0.2126.6Gma.9914.1.S1_atAt1g11450--3e-17At4g38350hedgehog receptorO.I.H.G.S.X.
0.2025.1GmaAffx.22143.1.A1_atAt1g11450--3e+0Atcg00360-O.I.H.G.S.X.
0.2025.1GmaAffx.39212.5.S1_atAt1g11450--4e-1At1g60740peroxiredoxin type 2, putativeO.I.H.G.S.X.
0.2025.1Gma.11398.2.A1_s_atAt1g11450--2e-21At1g70490ARFA1DO.I.H.G.S.X.
0.1822.3GmaAffx.24872.1.S1_atAt1g11450--2e+0At5g04260WCRKC2 (WCRKC THIOREDOXIN 2)O.I.H.G.S.X.
0.1721.2Gma.3680.1.A1_atAt1g11450--2e-6At1g07705transcription regulatorO.I.H.G.S.X.
0.1518.7GmaAffx.7159.2.A1_atAt1g11450--3e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.1417.5GmaAffx.56626.1.S1_s_atAt1g11450--4e-1At1g79880La domain-containing proteinO.I.H.G.S.X.
0.1417.5GmaAffx.68762.1.A1_s_atAt1g11450--3e-6At4g32930unknown proteinO.I.H.G.S.X.
0.1417.5Gma.14833.1.S1_atAt1g11450--1e-2At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)O.I.H.G.S.X.
0.1417.5GmaAffx.9540.1.S1_s_atAt1g11450--2e+0At4g27100RAB GTPase activatorO.I.H.G.S.X.
0.069.0GmaAffx.3641.1.S1_atAt1g11450transcription factor bZIP101-3e-2At1g32150bZIP transcription factor family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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