Co-expression analysis

Gene ID HV_CEa0010I04r2_s_at
Gene name
Homology with ArabidopsisSimilar to At3g23715: SCRL13 (SCR-Like 13) (HF=8e-1)
Module size 6 genes
NF 0.11
%ile 13.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.89HV_CEa0010I04r2_s_atHV_CEa0010I04r2--8e-1At3g23715SCRL13 (SCR-Like 13)O.I.H.G.S.X.
0.3240.30.94HC113E08_SK_atHC113E08_SK--7e-2At5g50490NF-YC5 (NUCLEAR FACTOR Y, SUBUNIT C5)O.I.H.G.S.X.
0.1716.90.94rbaal17m22_atrbaal17m22--3e-1At5g28615-O.I.H.G.S.X.
0.075.80.94HVSMEm0021I24r2_atHVSMEm0021I24r2--3e+0At1g68650unknown proteinO.I.H.G.S.X.
0.064.80.94EBro08_SQ004_N23_atEBro08_SQ004_N23--6e-5At1g76100PETE1 (PLASTOCYANIN 1)O.I.H.G.S.X.
0.043.40.952623978_R_1403-2212_at2623978_R_1403-2212--2e+0At3g16350myb family transcription factorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.099.6GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
10.499.2GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
9.098.9GSM282021Malting_day4_Legacy_rep 2GSE11200Expression data from malting barley seedsLink to GEO
8.298.7GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seedsLink to GEO
7.398.5GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.196.2GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
3.695.3GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.595.1GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.595.1GSM71159Steptoe stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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