Co-expression analysis

Gene ID HV_CEa0004G02r2_at
Gene name
Homology with ArabidopsisSimilar to At5g27830: - (HF=3e+0)
Module size 6 genes
NF 0.13
%ile 16.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.1919.60.94Contig24971_atContig24971--7e-3At3g01513unknown proteinO.I.H.G.S.X.
0.1412.90.962623978_R_1403-2212_at2623978_R_1403-2212--2e+0At3g16350myb family transcription factorO.I.H.G.S.X.
0.1311.60.96Contig16230_atContig16230--1e+0At3g17280F-box family proteinO.I.H.G.S.X. (PLASTOCYANIN 1)O.I.H.G.S.X. proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.1GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.596.7GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.995.8GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
3.194.1GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.993.4GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
2.993.4GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
2.792.7GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
2.792.7GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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