Co-expression analysis

Gene ID	HVSMEn0022J09r2_at
Gene name
Homology with Arabidopsis	Similar to At3g55070: - (HF=2e-1)
Module size	6 genes
NF	0.54
%ile	74.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.91	HVSMEn0022J09r2_at	HVSMEn0022J09r2	-	-	2e-1	At3g55070	-	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.91	baak2o06_x_at	baak2o06	-	-	3e+0	At3g12250	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.88	HV_CEa0013M08r2_at	HV_CEa0013M08r2	-	-	2e+0	At5g38020	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.91	rbah53j14_at	rbah53j14	-	-	4e-2	At3g26650	GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT)	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.92	Contig9655_s_at	Contig9655	-	-	4e+0	At4g22520	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.91	Contig9343_at	Contig9343	-	-	9e-5	At2g22670	IAA8	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.2	96.3	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.0	93.8	GSM373007	genotype: 11542 - pathogen isolates: K1 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM372972	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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