Co-expression analysis

Gene ID	HVSMEn0020I19r2_at
Gene name
Homology with Arabidopsis	Similar to At1g72290: trypsin and protease inhibitor family protein / Kunitz family protein (HF=2e+0)
Module size	6 genes
NF	0.47
%ile	65.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.94	HVSMEn0020I19r2_at	HVSMEn0020I19r2	-	-	2e+0	At1g72290	trypsin and protease inhibitor family protein / Kunitz family protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.87	Contig26424_at	Contig26424	-	-	4e+0	At5g13240	transcription regulator	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Contig26400_at	Contig26400	-	-	2e-5	At5g63040	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.92	Contig10250_at	Contig10250	-	-	2e-5	At1g04950	TAF6 (TBP-ASSOCIATED FACTOR 6)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.92	HVSMEh0086G04r2_at	HVSMEh0086G04r2	-	-	3e+0	At4g03280	PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C)	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.93	Contig18085_at	Contig18085	-	-	4e-11	At3g56370	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.2	97.4	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
4.5	96.7	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
4.5	96.7	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
3.6	95.3	GSM372971	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM419974	Lemma_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.3	94.6	GSM440959	Control lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.2	94.3	GSM68902	27 h control replicate 2	GSE3097	Barley1 salinity stress study

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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