Co-expression analysis

Gene ID	HVSMEm0022K13r2_at
Gene name
Homology with Arabidopsis	Similar to At5g35100: peptidyl-prolyl cis-trans isomerase (HF=1e+0)
Module size	6 genes
NF	0.27
%ile	33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.84	HVSMEm0022K13r2_at	HVSMEm0022K13r2	-	-	1e+0	At5g35100	peptidyl-prolyl cis-trans isomerase	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	rbaal28o12_x_at	rbaal28o12	-	-	1e+0	At2g13570	NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.94	Contig24913_at	Contig24913	-	-	1e+0	At1g32370	TOM2B (TOBAMOVIRUS MULTIPLICATION 2B)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.94	HW01F21u_at	HW01F21u	-	-	6e+0	At1g07901	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.92	HVSMEg0005C14r2_at	HVSMEg0005C14r2	-	-	1e+1	At4g19770	glycosyl hydrolase family 18 protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.93	HU08C09u_at	HU08C09u	-	-	8e-1	At3g30260	AGL79 (AGAMOUS-LIKE 79)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	96.8	GSM363464	5 mM B(OH)3 treatment (5B) - rep2	GSE14521	Late response to boron toxicity in barley leaves
3.8	95.7	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
3.8	95.7	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM363462	Control (C) - rep3	GSE14521	Late response to boron toxicity in barley leaves
3.8	95.7	GSM419972	Lemma_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.8	95.7	GSM440957	Control lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.4	94.8	GSM68893	3 h salt stressed replicate 2	GSE3097	Barley1 salinity stress study
3.1	94.1	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM71156	Morex stress and unstress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.0	93.8	GSM311245	28-4_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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