Co-expression analysis

Gene ID HVSMEm0022K13r2_at
Gene name
Homology with ArabidopsisSimilar to At5g35100: peptidyl-prolyl cis-trans isomerase (HF=1e+0)
Module size 6 genes
NF 0.27
%ile 33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.84HVSMEm0022K13r2_atHVSMEm0022K13r2--1e+0At5g35100peptidyl-prolyl cis-trans isomeraseO.I.H.G.S.X.
0.5066.90.94rbaal28o12_x_atrbaal28o12--1e+0At2g13570NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)O.I.H.G.S.X.
0.2732.10.94Contig24913_atContig24913--1e+0At1g32370TOM2B (TOBAMOVIRUS MULTIPLICATION 2B)O.I.H.G.S.X.
0.2326.10.94HW01F21u_atHW01F21u--6e+0At1g07901unknown proteinO.I.H.G.S.X.
0.2021.10.92HVSMEg0005C14r2_atHVSMEg0005C14r2--1e+1At4g19770glycosyl hydrolase family 18 proteinO.I.H.G.S.X. (AGAMOUS-LIKE 79)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.696.8GSM3634645 mM B(OH)3 treatment (5B) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
3.895.7GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leavesLink to GEO
3.895.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM363462Control (C) - rep3GSE14521Late response to boron toxicity in barley leavesLink to GEO
3.895.7GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.895.7GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM688933 h salt stressed replicate 2GSE3097Barley1 salinity stress studyLink to GEO
3.194.1GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.093.8GSM71156Morex stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.093.8GSM31124528-4_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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