Co-expression analysis

Gene ID	HVSMEm0015H16f_s_at
Gene name
Homology with Arabidopsis	Similar to At1g23490: ATARF1 (ADP-RIBOSYLATION FACTOR 1) (HF=2e-19)
Module size	6 genes
NF	0.17
%ile	21.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.84	HVSMEm0015H16f_s_at	HVSMEm0015H16f	-	-	2e-19	At1g23490	ATARF1 (ADP-RIBOSYLATION FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.91	HW06N09u_x_at	HW06N09u	-	-	3e+0	At4g14805	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.89	HVSMEc0007F14f_at	HVSMEc0007F14f	-	-	7e+0	Atmg01220	-	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.89	HW09H11u_at	HW09H11u	-	-	2e-1	At1g17510	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.89	HU10G19u_x_at	HU10G19u	-	-	1e-1	At4g01150	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.88	HD07C21r_x_at	HD07C21r	-	-	4e-6	At2g36530	LOS2	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.2	99.4	GSM238423	Endosperm 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
11.7	99.3	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
10.4	99.2	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
6.7	98.3	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.0	97.9	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.5	97.6	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.0	97.2	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.8	97.0	GSM431572	pathogen isolates: Polymyxa betae - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.6	96.8	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM160822	38% SWC rep3	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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